rs6297732 SNP Detail

Summary

• ID
  rs6297732
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121801473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATAAGCTG CTCCTTCCAG
  GTTCCTGCCC TGACTCCCCT CAGTGATGGA CTGTTAGTTA CGAGGGTAAG CTAGATGAAC
  CCTTCCCCCC AGTGACCCTA AGACTTGGTC TTCCTTCACT TTTGTCATTA GCTGTTCCTG
  GACATCTCAT CTCCCTGTGG CCATCAAAGA CAGGACCTTT CCTTCCAGCA TCCATCCATG
  R
  TGGCTTCTCA TTGGCTATGG AGGGGCTGTG TGTGATTTCT ATGTGGTCAT CTTGTTACTC
  TCCTCTACTA ACTTCATGAT ATCCTCCACC CATATGCGCA TGGGCAGTTG GACAGGGCGC
  GGACATGCTG AGGTCAGGGG TTGCCAACTT TTGAAGTTGC ATTCCTCAGG TGCCTGTTGA
  ATGTATCGGC CTGGAGCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8703639	WI_WGS_9_123405590	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6297732					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121801473 () rs orientation: forward

Symbol	Name	Function Class
Gask1a	golgi associated kinase 1A	within coordinates
Rr689133	regulatory region 689133	1645 bp proximal