rs6298805 SNP Detail

Summary

• ID
  rs6298805
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AGATTAGGCT
  TCAATATTCA GCCCCAAAGG AACatgtata tatgtatatg tgcttgtata tatgtatatg
  tgtatctaGT GTTTTGTAAA TTAATCCCTG TTTGGGAAAT TCAAATAACA AGAAAATGGA
  TCCACGCCAG CCCAGTGAAA GCAAGCTATG TTAATATCCA TCCTTCTATC ACATCAAACA
  GATGAGGTTA AAATGTCTTC CTCCTGGGGC TGGAGATGTG AGATTGAGTG TTTGGTTTTG
  R
  GTTTTTTTTT TAAATCACTA ATTTATATTT GCTGCTGCCT TCAGGTCAAG CTAGTTGCTC
  ATTCTCACTT CAGTACCTAA TACTCAATAG AAGTCCATCT CAGGTCAATG TCACAATTTC
  CTATACACAA TTTAGTGACC ACTTAGGAAT TCTAGTCAAA CTAGGAGGGT TATAGTGAGT
  AGCAATAAGG AAACAAGTAC AAGGTGATTA AAATTTTAGG GGAAAGGAGA ATAAGACTTA
  ATGAAGCACA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8704717	WI_WGS_9_53018838	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6298805					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582854 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1488 bp downstream