rs6308843 SNP Detail

Summary

• ID
  rs6308843
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:74750463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TGAAAGGCAT
  ACAAAGATGC CTCAAACAGA CACACATGAA AATATTAACA GATAGGAAGA AANAGGTTAT
  TGAAAGATTG NATGGGTTCC CAGAAGGAAA GATTAGCAAC CATGAAGATG GACCAAAATG
  AGATATCTGA TACCAAATAC AGAAGGAAAA TAAGACTTTG AAATTTCATA ANAGATTATT
  CTAGGTCGTG AGATAGGTAA ggctcagtag gtaagaccct tctcangaag cctgatggcc
  Y
  gacttcagtc ccccaagtgc acanaatgac aatcaaaaan caagtcctga aagttgtcct
  ttgacataca cacatgcacA CAAGCAGATA AATAGATGTC TAAATGTTTA AAATACATAT
  GCATTTTCTA CTTAAACTCT TTTATAATTT TCTATTTAAT CTATTTTAAA TTCTTATGTA
  GATTTCTGAT GTCTATTCTA TACCACAGAG CAGAGTATTC AGTTTGAGAG ACAGGACGTG
  CAAGTTCAGA                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8714792	WI_WGS_12_69367239	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6308843					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:74750463 () rs orientation: forward

Symbol	Name	Function Class
Gm47619	predicted gene, 47619	1557 bp downstream