rs6311833 SNP Detail

Summary

• ID
  rs6311833
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:143132043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTCAGGTT AGAAAATATC
  CTCTTTCATA GAAAGGAAAC AGTATAGTCT ACCATAATTC TTCTGGATGT GATAGACACT
  ATAAAACATC TGTGAAGTTA TATAAACTAC ATTTAGATTG TCTAAGATAA AGGAGAAAAA
  AACCAACAAA TGTATAGGAA AACTAGTGTA AACAGACTTA ATGAAAATGC ACTTGATCCA
  R
  GGGTGATGCC ACATGCTTTA AATCTAACTC TCAGGAGTCT GAAGAAGCAA ATCTCTTTGA
  GTTTGAGGTC AGCCTGGTCT ATGTAATGAG CTGTAGGCCA GCTAAGGCTA TATAATGAGA
  CCTTGTTTCC AAGAAAAACA GAAAACGGTA ATGTGCTTAA AAGTAAAGAA GGCTATGTTA
  GTGTTTTGAA TGAGAGTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8717794	WI_WGS_X_123586607	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6311833					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:143132043 () rs orientation: forward

Symbol	Name	Function Class
Alg13	asparagine-linked glycosylation 13	within coordinates