rs6312864 SNP Detail

Summary

• ID
  rs6312864
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:24022650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTTTCTCA TGTTGTGGTG
  ACCCCTAACT ATGAAATTAT CTTGTTGCTA CTTTATAACT GTAATTTTGA TACTGTGATG
  AGTCCTAATA TAAATATCTG CTATGCAGGA TATCTGCTAC GTAACCCCTA AGGTGTCTCA
  ATCCACAAAG GAGTAGTTGC TACATTAATG TTGTTAACTC AGAAGCTAGA ACAAATCCCA
  R
  CACACTTACT GAAGCAGGTA GATCGCTGTA TGAGAAAGCA AATTGGCTTG CCAAGAATCT
  TTGGAATAGG GGCTAATAAT TCACTTCTAA GGCTAAAAAG ATATGCACTT CTTGGGGCTG
  GAGCAATGGC TGCTCAGCAG TTAAGCGTAC TGGCTGCTTT TCCAGAGGAC AGAGGTTTGA
  TTCTCAGCAC ACACATGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8718831	WI_WGS_1_24371904	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6312864					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:24022650 () rs orientation: forward

Symbol	Name	Function Class
Gm53062	predicted gene 53062	within coordinates
Rr36322	regulatory region 36322	2 bp distal
Rr395981	regulatory region 395981	138 bp downstream