rs6314101 SNP Detail

Summary

• ID
  rs6314101
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:43815806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         gggctaggaa
  gaggatggca gctgtgatta ggatgtaaag tgaataaaaa aattaaAAAC AAAACAAAAA
  ATTAAGATAC AAATCATGGG AAGAAGTAAA GGAATTAACA CTTACTGAGT TCATAACATG
  TGTTTGGGAT TTTATTTTTC CCCTCATTTT ATCCTAATGC ACCCTTCCCT TTTTCTAGTT
  TAAAAAAATA AAGGTTCCAT GAATATAAAA GCTGAGCTCT TGCTAAGACT TAGGACTTAC
  Y
  CCGACTCAGT CTGACCCTAA GGCTGTTCTC TATCTCAGTA TCTTTCTGCA TCTTTCTCTT
  ATAGAAATGG ATATTATATT TGTTAGATAT NAAGAGTCAT CCATAACTTA AGGGACTGAA
  ATAAGTTCTA GACAAGTTAT TTTAAGAGAT GGTACACCTC CCTTTCTTAT GAATCCAAGT
  TTTTTCTTTA TGTTTTATTT TTTGTGATGG AGTTATGGCT TCAGCTATAC TTAGCTATTT
  GTAACCTCCC                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8720072	WI_WGS_6_44057461	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6314101					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:43815806 () rs orientation: forward

Symbol	Name	Function Class
Gm35163	predicted gene, 35163	383 bp upstream
Rr144146	regulatory region 144146	138 bp proximal