rs6316908 SNP Detail

Summary

• ID
  rs6316908
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:28680905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCAATTAAGT
  GGGATTCATA TGAACAACTT ANGGGTTTGT ACAAGTCCAG AAATTAGCAT GGAAATGGCT
  GTTGTGAGAA AAAAGCTCTC CTGGGTTTCC TCTGGTAAGC CCAGGTGTTC CAGGTTTTTT
  AAAAATCACT TCATTTATTT TGATGTGTTC TACAACAATC TGATGGAGAT GAGAGGGGCA
  GCTTCATGCC CAAACCTCTG GCACTGTGGA TCAGAGCAAA TGCCTCCCAG TGCACTGACA
  S
  CCCTGGNCAT TNACTACCAC CGGCCTGGAC CACTGCAACA CAGGAAGATG GTCATACCCG
  ACCCAGCGGT TCTTAGCGGT GGTTGCTACC CACATCTTTT ACTTAAGAGC TATTCAGCAA
  ATCTCAACTC AGTTTTAGTT GTTACCCTTG AAAGTGGGAG GCAGCACTGG AGACAATTGT
  TGTGATACAG AAAAGGGGTG GAGCTAAACA TTCTCCAGTT CCCAAAAGGG GTGGAGCTAA
  ACAGTCACCA                                                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8722887	WI_WGS_3_28453819	WI	MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6316908					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28680905 () rs orientation: forward

Symbol	Name	Function Class
Rr374734	regulatory region 374734	within coordinates
Tnik	TRAF2 and NCK interacting kinase	within coordinates