rs6316913 SNP Detail

Summary

• ID
  rs6316913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:136512551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AGATGGAAGA
  ATTACAAAAT CTCCGTGGTT CCTATGAATT TTATCATACC CTCATTCTGC ACCTACTGTT
  TCAAATGTGG CACCTGTGAG CTGTAAACGA CGTAATCCCC TTTGCCTGTA TTAGAATTCA
  CTGTGAATGT TGAATGTGCA AAGTGTGAGG ATATGATCTT CCATGAGCAG GAGACGGGTT
  GCCCTCCTCA GGCTGCTTGC TCAGAACAGC CATTTGCTCT TCCTTTGGCT GGCTGCCTCT
  Y
  CTGGTAATTT TCTGCTGCAG CTCTCTCTTT ACCCCAGCCA GCAAGAGGAA AATGAATTCA
  CCCAGCAGTC CCAGCCATCC CTTCNGATAT TTCAGGAAGA GAACTCGCCA GGCATTTCGC
  TGTTAATTAT CAGCAGCCTG GCTGCTGTGG CCCCCTGCTG TGCCAGTTTG AGAGATGAAA
  CTCTTTACAC TGCTTATTGG GCTCAGCTAA ATAAATATTA CCCAGCATTA GTGTTGTCAA
  AGATAACAGT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8722892	WI_WGS_2_137698232	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6316913					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:136512551 () rs orientation: forward

Symbol	Name	Function Class
Gm32659	predicted gene, 32659	within coordinates
Rr565852	regulatory region 565852	1157 bp distal
Rr565853	regulatory region 565853	623 bp distal
Rr565854	regulatory region 565854	within coordinates