rs6317176 SNP Detail

Summary

• ID
  rs6317176
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67619360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTT TGGAGATGAC AGTGTCTACC
  Y
  TGGGTGATAA AACCAGAGTG GGGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8723155	WI_WGS_9_68311388	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6317176					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67619360 () rs orientation: forward

Symbol	Name	Function Class
Gm67856	predicted gene, 67856	1367 bp upstream
Rr681959	regulatory region 681959	54 bp distal
Rr681960	regulatory region 681960	329 bp distal
Tssr90350	transcription start site region 90350	1168 bp upstream
Tssr90351	transcription start site region 90351	1414 bp downstream