rs6317191 SNP Detail

Summary

• ID
  rs6317191
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:158495363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGATTAAA GGCGTGCGCT
  TTTCTTAAGA CTTTTGGGTC TTCTAAACTG ATTTTGTGCC CTTCTGCTCA GTGGTTACTC
  AGTTTGAAAG ACACTGCTGG GATGGTATAA GCTATGTTTA CTTTAGCTAC AGGCTTGCAC
  CATCTAAGCC ACTTTAAAAT TATTTTGCAA CAGTATAGCG TGCATATAAA AAACACACAC
  R
  GGCATATGTC TTGTTGAATT CTCATTCACC AAGCATGCCT GTGTAGCCAG CAGCACATCG
  AAACACATGC TACTGATTCC AGCTTCTTTG AATCAAGACA GAGGAGTGGA GTACAACAGA
  AATGAAGAGT CTGTTGGTTC GTTCTGAATT CTATCTGCAG AACTTATTTG CTAGATCCTC
  TTTTGGTGGA AGTATGTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8723170	WI_WGS_X_136814152	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6317191					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:158495363 () rs orientation: forward

Symbol	Name	Function Class
Rr8414	regulatory region 8414	1762 bp distal
Rr9419	regulatory region 9419	164 bp distal
Rr9420	regulatory region 9420	638 bp proximal
Sh3kbp1	SH3-domain kinase binding protein 1	within coordinates