rs6318448 SNP Detail

Summary

• ID
  rs6318448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:19915256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTTGGTA AAATGGTCTT
  GGAGAATGGT TTGCTTGGTT GTTATTTCAG TTTTCCAAGT GTGAGTTTGA GGGGCAGATT
  GTCCCCTGAG CAGGAAGACT GAGGTGGCTG GCGGCTGTCC AGCAAATACA GGCAGTGCAG
  TTCTGTATTT AGAGGCTGAG TAGAGACATG GGCCACTGCA GTTTCAAGAA CTTCCTCTGG
  R
  AAGGAGGAAA GCTGTGCTGG CAGCAGTGAA TGCTTATGTA AACATTCAGT GAACTAGTTT
  GCTTCAGATG ATATTAAAAA TATCATGATT TTAAAATATT AAACCATAAG AGGCAGCTTT
  AGCTCTTGAC CTTTAAGTGT CATGATAATT AGGATGTTTA AAATTGTTAT TACACAAATA
  TATATTTGAT AAATATCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8724430	WI_WGS_13_19136537	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6318448					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:19915256 () rs orientation: forward

Symbol	Name	Function Class
Gpr141b	G protein-coupled receptor 141B	within coordinates
Tssr121608	transcription start site region 121608	1644 bp downstream
Tssr121609	transcription start site region 121609	1714 bp downstream
Tssr121610	transcription start site region 121610	1843 bp downstream