rs6323734 SNP Detail

Summary

• ID
  rs6323734
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88433199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAATGACA AAAACTGCAC
  ATCATCTTTG TGTCCCCATG GACTGTAAAC GTAGAGATGC ACACAGTAGT CAGACACTAT
  TGCTAGTGGG AGATGGGTGA TCCAAGCTAG GATTCGGATG CCCAGAGACT CCTTAGTTTA
  CACGCAGTGT AAGGTACACA AAGGAAACCT TCTTGGGGGA TGTTTCATAT CAGTCACACC
  K
  CAGCTGCGGA TGTGGTGTGT GACTGTTGCG GGTGAGTGCA CTTGTGTGTA TATGTGTGTG
  TGGGGGGGCA ACATGTGGGT ACAAGAGTGC GTGCATGCAT GCAAAGGATG GGATAAACCC
  CAAGTTTCTC CGTGGTTATC TGGCAGATCA CCACGGAAAG AGACAGGCTC AGCTAAGCTC
  ACGATGCAGC CCTACTTCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8729719	WI_WGS_11_89209295	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6323734					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88433199 () rs orientation: forward

Symbol	Name	Function Class
Msi2	musashi RNA-binding protein 2	within coordinates
Tssr110017	transcription start site region 110017	1905 bp upstream
Tssr110018	transcription start site region 110018	727 bp upstream