rs6324477 SNP Detail

Summary

• ID
  rs6324477
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82744959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATCTGACA TTTCTGTGAT
  GACTTCAGTG AAGCTCTTTT GCCTATAATT ACTTTTCTAC TGTTCATTAG TTGATGGTCT
  CATTCATGTA GAAAATTAAT TCACTACATT CCAAAAGAAT AAAAGATGGC CTAGAAATAC
  AGGAGTGCTT GTAAATTTCC CGGCAAATGG CTCAATTCCT TCTCAGGTGA CCCTATCACT
  Y
  AATAATTTTA AGGTGCCAAT TTAAATAATA GCAGTTAAAA TTTTAGGTTA TAACCTAGAT
  ATCACAAACT ATCATCAAGT GTAAAGTTTT ATTCACATTA CATGAAATCT GTATACCAGA
  CTGCAATCTA TTGAATCATA AACATCTGAA ATTGGCAGAG ATTCAGAGAC AGAAAGAAGT
  TGAGAAGATG GCAATCCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8730464	WI_WGS_9_83801603	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6324477					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82744959 () rs orientation: forward

Symbol	Name	Function Class
Gm38553	predicted gene, 38553	within coordinates