rs6324954 SNP Detail

Summary

• ID
  rs6324954
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110710063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCCAGATC CACTCCCTTT
  CTTTTTCTCA TTAGGAAACA AACAGGCTTC TAAGGGACAA TAATGAAATA TAACATAACA
  CAAGAAAACA AGTTTGATAC ACTGGAATAG GACAAAATTA ACAGAAGGAA GGAACACAAG
  AAAACGCACA AGAGACAGAC ACAAATACAG AGACCACTAG ATCACGCACT TAGGAATCCC
  R
  CAAAAACACT AAACTGGAAG CCATAATATA GATGCAAAGG ACCTGTAGGG TAAAAGGAGA
  GAAAAACACA AATAAAATAA TAAAATACAA AAATCATAGC CCTGGCATGA CACTATGAAA
  CAAGGCACCT CCAATGTTGA GTTGGTTTCC CGTTGGCTGA GCATGCTACC CACCCCTAAG
  AGTAGTTTGC TTCTCCATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8730941	WI_WGS_8_109876192	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6324954					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110710063 () rs orientation: forward

Symbol	Name	Function Class
Gm64950	predicted gene, 64950	within coordinates
Rr173822	regulatory region 173822	1138 bp proximal
Rr182743	regulatory region 182743	475 bp distal
Rr187609	regulatory region 187609	138 bp proximal
Rr382637	regulatory region 382637	1403 bp upstream