rs6325866 SNP Detail

Summary

• ID
  rs6325866
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:24022795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGGAGTA GTTGCTACAT
  TAATGTTGTT AACTCAGAAG CTAGAACAAA TCCCAGCACA CTTACTGAAG CAGGTAGATC
  GCTGTATGAG AAAGCAAATT GGCTTGCCAA GAATCTTTGG AATAGGGGCT AATAATTCAC
  TTCTAAGGCT AAAAAGATAT GCACTTCTTG GGGCTGGAGC AATGGCTGCT CAGCAGTTAA
  R
  CGTACTGGCT GCTTTTCCAG AGGACAGAGG TTTGATTCTC AGCACACACA TGGGAGCTCA
  CCGCTGTTTG TAATTTCATT CTTGGGGAAT CTGGCGCTCA TTTTTGGAGT CTGAGGGCAT
  ACGGTACACA GACATACCTG CAAATAAAAT ACCCATACAC GTAAAATTAA AACTAAATTA
  ATGAACAGAT GGATGAGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8731853	WI_WGS_1_24372049	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6325866					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:24022795 () rs orientation: forward

Symbol	Name	Function Class
Gm53062	predicted gene 53062	within coordinates
Rr36322	regulatory region 36322	147 bp distal
Rr395981	regulatory region 395981	283 bp downstream