rs6327639 SNP Detail

Summary

• ID
  rs6327639
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:97003480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGTTCA ATACCCACCT
  GAACACACAC ACACACACAC ACACACACAC ACACACACAC ATACACCCCT CTATCTGAAG
  AATGTCATGT AGCCTTAGTT AGGTTGTAGG TTCAACTTCT TTTCTGTCTG CCCCTGCTCC
  CCATAACCCA TTCAGCTAGC ACCCGCGATT CCCAACATAC TTCTCCACGC TAATGAGACA
  K
  TTTGGTACTT TAACCCTTCA GTTAATGACT TTTGCCTATC CTGGATGTTC CTATCTCTAC
  TCCCCCAAAT TATATAAGCC TTGAATAACC CCAGATACAG TTGAACTGTC TCCCTCCAGC
  TGGTCCTGAT GTGTCTTCTT CACCATACTT ACTCACAGGG CTTCCAACCC CTCCCTCTCC
  CATCTGTCAT CTCTGCTCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8733627	WI_WGS_10_97394567	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6327639					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:97003480 () rs orientation: forward

Symbol	Name	Function Class
D10Mit142	DNA segment, Chr 10, Massachusetts Institute of Technology 142	108 bp distal
D10Mit142.2	DNA segment, Chr 10, Massachusetts Institute of Technology 142.2	227 bp distal