rs6328908 SNP Detail

Summary

• ID
  rs6328908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17161248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ATAATCTCTG
  TGGTTTATGA TAATAATCTG AACAGCAAAC AGTGCCNTTA AGTGCACAGA TGTTAATGCA
  ACTAATGGTT GTGCCAGCTA TTCCCTAGAG GTCCTAGACA CACAGACTGC CTTAGCCCCC
  ACACCTCTGT CCCTAGGAGA ATGAATGGGC AGAGTGGAGC TGACACTCTC TCCTCAGGCA
  GCCTCCNCAG CCTTTATTCG TCAACGGCCT CTGCTCAGCC AGGCCCTTCC AGACNAAAGG
  Y
  NCTGAGGAAC TTGCACCCCT TCCAGGGAGG GTGTCCAAGT AGCACCGTTC CTGCCCAGTG
  GGAAAGCAAT CNCAACATGT CTGAGATGTT CGGACTTTTA AATTCATGTA AATATCTCCT
  CTTCTGCTGT GTGTACATAG GACTACATAN TCTATCCTAG AGATAAATAA ACAACCATAT
  TTACCATGTA TCTGTTATAA TTCTCTCtta tttatttttt atagatacat atttttatta
  tttttaaCTT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8734900	WI_WGS_16_16815262	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6328908					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17161248 () rs orientation: forward

Symbol	Name	Function Class
Gm24927	predicted gene, 24927	1372 bp upstream
Pi4ka	phosphatidylinositol 4-kinase alpha	within coordinates
Serpind1	serine (or cysteine) peptidase inhibitor, clade D, member 1	within coordinates