rs6330973 SNP Detail

Summary

• ID
  rs6330973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70039972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         aaggaaggaa
  aggcagacag aagagaagga aggaaaggca gagagagaga gagagagaaa AGgaaaaaaa
  gaaagaaaat aaaggaagga agaaagaaag aaggaaggaa aggcagacag aagagaagga
  aagaaaggca gagagagaga gagaaaagga aagaaaaaag aaaaagaaag aaagaaagaa
  agaaaggaag gaaggaagga agaagaaaga aagaaagaag gaaagaaaga aagaGAAAGA
  R
  AGAAGAAAGA AAGGCAGGCA AGCAAACAgg ctagaaaggt ggctcagcag ttaagaccac
  acattgctct cacagagggc ctgggttgag tttccagaat ttacaagtag tcacccacct
  gtaactatag ctccagcagg cctgatattc cttattgccc tccttaaaca cccctgacac
  cccccacaca catacacaTG ACATTACACA CACAGACACA CACACACAGA AATAAAACTA
  AAACAGTTTT                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8736973	WI_WGS_10_70262333	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6330973					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70039972 () rs orientation: forward

Symbol	Name	Function Class
Mrln	myoregulin	522 bp upstream
Rr433580	regulatory region 433580	262 bp proximal
Rr433581	regulatory region 433581	536 bp proximal
Tssr94004	transcription start site region 94004	490 bp upstream
Tssr94005	transcription start site region 94005	503 bp upstream
Tssr94006	transcription start site region 94006	511 bp upstream
Tssr94007	transcription start site region 94007	533 bp upstream