rs6330981 SNP Detail

Summary

• ID
  rs6330981
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68150526 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TAGTGGTCAC
  ATACTTGGGA AAGGTCAATT CCCTTCTACA TACTCTTTAG AAcagtggtt ctcaaccttc
  ccagtgctgc gaccctttaa tatagttcct catgttgtgg tgacccacag tcataaaatt
  atctcattgc cacttcataa ctgtaacttt gctactgtag tgagttgtca tgtagatatc
  tgtgtctacc gagggtctta tgtgacctct gtgaaagggt tgctcantta tctccaaagg
  R
  tcgagaccca caggttgaga aactctgCTT TAGTTGGCCT GGCTAAGCAC AGTTTTTACT
  AGGATTTAAG CAAGGAAGAG GGAAGGTGCA GAGGAAAGAA CATTTAAACT ATCTTGACAT
  CAGGGTCACA AAGATTTCCC ACACTGGCTC AGCTCAAAGT CATGTGCCCT TGTCTTCATC
  CCCAGCGTGG CTTCCAGTTC CACCTTCCGT GCATGCTGGT TTTTACAATT CTCAATTGTT
  TTCCTTCNTT                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8736981	WI_WGS_10_68367527	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6330981					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68150526 () rs orientation: forward

Symbol	Name	Function Class
Gm47078	predicted gene, 47078	within coordinates