rs6331632 SNP Detail

Summary

• ID
  rs6331632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108222897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGACCATGG CAATGGGGTT
  TTCAAGGGAG GAAAGGTTGG ACACAGATAT ATGAAAAGGG AAAGTGGGAG CAGGAATGAT
  GAAATGGGGT ATAGGATGGG AGGAGGAAGA GGTAATACAA GGAGGGATAT AAAGCGGGTG
  TCGTGGCGCA CGCCTTTAAT CCCAGCACTC AGGAGGCAGA GGCAGGCAGA TTTCTGAGTT
  Y
  GAGGCCAGCC TGGTCTACAA AGTGAGTTCC AGGACAGCCA GGGCTATACA GAGAAATCCT
  ATCTCAAAAA AACAAAACAA AACAAAAACA ACAAAAAACA ACAAAAACAA ACAAACAAAA
  AACAAAAAAA GGAGGGATAA CTAACACTAA AAATCTTCTG AAAAAGCCAT CTGAAAAACT
  ACTACCATAA AGCATCCTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8737634	WI_WGS_3_108807772	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6331632					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108222897 () rs orientation: forward

Symbol	Name	Function Class
Rr583206	regulatory region 583206	1097 bp distal
Rr583207	regulatory region 583207	1118 bp distal
Sort1	sortilin 1	Intron