rs6331817 SNP Detail

Summary

• ID
  rs6331817
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:127598527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGAAGAA TGCCAAGTCT
  AAACACAGCC TGACTACCTA ACAAGGCACG ACTTCACAAC TCCAAGGGCT GGTCAGCGCT
  TGGGAGACAG AGGCAGGTGG ATCTATGAGA CCTCAAGGCC AGCCTGGTCT GCAGAACTAG
  TTCCAGGACA GCCAGGGCTA TATAGTATAA CCCTGTCTTA AAACAGACAG AAACAAACAG
  M
  TCTAAGGGCG GGCTGGGGAG CTCCGGGTGT AGTTCAGTGG TGGCAAGTTT GGTTTTCCTG
  AGTGAGACTC CGATGAGGGG CAAGGGAGAG ATCATAAATG GTCGTTAGGA AAACTCAGAA
  GCCGATGTAG AGAATTCAAG ACAGTATTAA GAGTAAAAGG ATGAAGCCAT CCAGAAATAA
  GGACTGGGTT TTAAAAACAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8737819	WI_WGS_8_126888511	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6331817					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:127598527 () rs orientation: forward

Symbol	Name	Function Class
Gm31718	predicted gene, 31718	within coordinates
Rr188682	regulatory region 188682	within coordinates
Rr188683	regulatory region 188683	274 bp proximal
Tssr83525	transcription start site region 83525	889 bp downstream