rs6331853 SNP Detail

Summary

• ID
  rs6331853
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:127598546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACACAGC CTGACTACCT
  AACAAGGCAC GACTTCACAA CTCCAAGGGC TGGTCAGCGC TTGGGAGACA GAGGCAGGTG
  GATCTATGAG ACCTCAAGGC CAGCCTGGTC TGCAGAACTA GTTCCAGGAC AGCCAGGGCT
  ATATAGTATA ACCCTGTCTT AAAACAGACA GAAACAAACA GATCTAAGGG CGGGCTGGGG
  R
  GCTCCGGGTG TAGTTCAGTG GTGGCAAGTT TGGTTTTCCT GAGTGAGACT CCGATGAGGG
  GCAAGGGAGA GATCATAAAT GGTCGTTAGG AAAACTCAGA AGCCGATGTA GAGAATTCAA
  GACAGTATTA AGAGTAAAAG GATGAAGCCA TCCAGAAATA AGGACTGGGT TTTAAAAACA
  GAGCAAATCC AGAAGATCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8737855	WI_WGS_8_126888530	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6331853					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:127598546 () rs orientation: forward

Symbol	Name	Function Class
Gm31718	predicted gene, 31718	within coordinates
Rr188682	regulatory region 188682	within coordinates
Rr188683	regulatory region 188683	255 bp proximal
Tssr83525	transcription start site region 83525	870 bp downstream