rs6332125 SNP Detail

Summary

• ID
  rs6332125
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68150774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         GGNTCGAGAC
  CCACAGGTTG AGAAACTCTG CTTTAGTTGG CCTGGCTAAG CACAGTTTTT ACTAGGATTT
  AAGCAAGGAA GAGGGAAGGT GCAGAGGAAA GAACATTTAA ACTATCTTGA CATCAGGGTC
  ACAAAGATTT CCCACACTGG CTCAGCTCAA AGTCATGTGC CCTTGTCTTC ATCCCCAGCG
  TGGCTTCCAG TTCCACCTTC CGTGCATGCT GGTTTTTACA ATTCTCAATT GTTTTCCTTC
  K
  TTCTATTATC TTGGACCAGT GGCTACTACT AGTAAAACAT TATCCAACCC TAAATCACAT
  CTTGGAGCTC AGCACATGAG CTCACTAACA AAATAGTTGA TGTTTGAAAC CTGGGGGAAC
  GTACTAATCT TTAAAACTCC TCTAAGCTCC GTCAAATCCA CTATTACGTC ATCCTAACAT
  GACCTGGATT CACAGGGCTA TTGTCAAATT ATCACTTGGA CCACTTTATT CTTGGACCGA
  GGTTTTGAGC                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8738127	WI_WGS_10_68367775	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6332125					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68150774 () rs orientation: forward

Symbol	Name	Function Class
Gm47078	predicted gene, 47078	within coordinates