rs6332225 SNP Detail

Summary

• ID
  rs6332225
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34874605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTAAACCA AACACAAAGC
  ACTCTCACCT TATAGGACAA GGCTGGATTC CCATGATTCA TCAGCCTCTA TTACATTACC
  CTCACTGCAT GGAATCTGGG AAAGAGCAGA GTGTGCGGAC AATATGCTTT CTCAGTTTTG
  AAAGTTCTAA GTAGGGAGGG TTAAATAAAA AATTTCTTCT TAAACTCAGA AATAGCTAGA
  M
  AATTCCTTTC CCTGGGTGCC ATGATTCATT AGGCTCAACT TAAAGACTTA AAGGTTTCGT
  TCATGATCAT CCTTCAATAC TTTTTTTTTT TTTTGGTGGG GTTGCAAGGA TAGGATTAGG
  GAGGGGCAAG ACAGATTATG TTAAAACGTT AAATGTTAAA ACTCTTAACA CAGTTCTAGG
  GTAAAACAAT ACTTACTGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8738228	WI_WGS_15_34978858	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6332225					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34874605 () rs orientation: forward

Symbol	Name	Function Class
Rr390556	regulatory region 390556	1728 bp downstream
Stk3	serine/threonine kinase 3	1040 bp downstream
Tssr133982	transcription start site region 133982	1751 bp downstream
Tssr133983	transcription start site region 133983	1871 bp downstream