rs6332435 SNP Detail

Summary

• ID
  rs6332435
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:116068013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTACAGG CCCACCAAGG
  CGCCATCATA GACACCAGGC CAGTGAGTAA AGCCAGTCTC ACTGCCCCGC TCCGTCTCAC
  TTTTTATTTT TAAGACAAGG ACCTGTTACT TAGTCCAGGC TAGCCTTGAT TCAATTTACC
  ATCTTCCTGA CTTTGCCTCC CAGTGCTGGT GGGGTTAAAG GCGTGCGCCA CCAAGGCTGG
  Y
  TCATGTTTGT GGACACTTTA CTTCTTCTTC TTTTTTTTTC TTTTTTTTTT TTGAGACAGG
  GTTTCTCTGT GTAGCCTTGG CTGTCCTGGA ACTCACTCTG TAGACCAGGC TGGCCTCAAA
  CTCAGAAATC CACCTATCTC TGCCTCTCAA GTGCTGGGAT TAAAGGCATG TGCCACTACT
  GCCCAGATGT TTCTATTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8738438	WI_WGS_9_117454665	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6332435					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:116068013 () rs orientation: forward

Symbol	Name	Function Class
Gm31410	predicted gene, 31410	within coordinates
Rr383972	regulatory region 383972	716 bp upstream