rs6332603 SNP Detail

Summary

• ID
  rs6332603
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70040281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCACCCAC CTGTAACTAT
  AGCTCCAGCA GGCCTGATAT TCCTTATTGC CCTCCTTAAA CACCCCTGAC ACCCCCCACA
  CACATACACA TGACATTACA CACACAGACA CACACACACA GAAATAAAAC TAAAACAGTT
  TTTAAAAGCC AGCTCCCTGC AGAAAAGGAG TGTGCAGAAG AGAAGGGGCT ATGTTCTCAC
  W
  GTGGAGGAGA TTTGTTGTTG CTTGCTGATA GTTTAGAACA GCTACCATGG GGACTTAAGG
  CATCCCCGCC TAGCGGCTTG CTTGACTTCA ATGTAAATAT ATTTTGTTAG ACTCTATCCC
  ACCTGTGTCT GTCAGTTTCT CTTGCCTCCT CCCCATGACA TTCTGGCTCA GGTTTCTGCC
  TAACACTCGG AGCCAGTTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8738607	WI_WGS_10_70262642	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6332603					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70040281 () rs orientation: forward

Symbol	Name	Function Class
Mrln	myoregulin	213 bp upstream
Rr433580	regulatory region 433580	within coordinates
Rr433581	regulatory region 433581	227 bp proximal
Tssr94004	transcription start site region 94004	181 bp upstream
Tssr94005	transcription start site region 94005	194 bp upstream
Tssr94006	transcription start site region 94006	202 bp upstream
Tssr94007	transcription start site region 94007	224 bp upstream