rs6333128 SNP Detail

Summary

• ID
  rs6333128
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:36533238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGG TGTCTTTATG GCTGTCTTTC
  M
  TAGATTCTGT GCTAAAATGC AGTTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8739135	WI_WGS_12_30612996	WI	MOUSE	f	SNP		C	A
ss38932521	mCV22951265	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss137630575	ENSMUSSNP3587083	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss324008682	CHEV_12_37209826	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6333128					SNP	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36533238 () rs orientation: forward

Symbol	Name	Function Class
Crppa	CDP-L-ribitol pyrophosphorylase A	Intron
Rr387069	regulatory region 387069	751 bp downstream
Rr465183	regulatory region 465183	186 bp proximal