rs6333503 SNP Detail

Summary

• ID
  rs6333503
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:127598857 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAATTCAA GACAGTATTA
  AGAGTAAAAG GATGAAGCCA TCCAGAAATA AGGACTGGGT TTTAAAAACA GAGCAAATCC
  AGAAGATCCA GACTTAAGAT CAGCAGCGAG GATAAATGGG AACGCAACAC CGCAAATGGC
  AGGAAGTAAG AGAACTGAAG GGGATCGGGG AGAAAGGGCC AAAAACAAAT GATGGGCAGA
  K
  GGGAGCCAAG AGTCCCCCCT CCCCCGAAAC TGAAAACTGA AGCAAAGAGC AGAACAAAGT
  TAAAATCAAG CCACTCAGGA AAACCTTTCT GGAGAAATGT CACAAATGTA CGAAAGTGCA
  GGCAGAAAGT AAAAATAAAC ACGCTGGAAT GGTTTCTGGT AAAAATTTTT AGATTTCAGA
  GGAAAGTACG AAGCCGCCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8739513	WI_WGS_8_126888841	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6333503					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:127598857 () rs orientation: forward

Symbol	Name	Function Class
Gm31718	predicted gene, 31718	within coordinates
Rr188682	regulatory region 188682	258 bp distal
Rr188683	regulatory region 188683	within coordinates
Tssr83525	transcription start site region 83525	559 bp downstream