rs6333668 SNP Detail

Summary

• ID
  rs6333668
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127573487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAATGAGC TTTTTTTTTC
  CAGAGGATAT AGATAAAACT TTTTAAAGTA AAATCCTTAA CTGTGTCTGA GAAATTGCAC
  ACGTGTGTGT GATAAGCTCA AAGGTCAGAC AAGGGTGGTC AGGAAGGGGT ATATTTTAGT
  AGCCTCTTGA ATCTTTTTCC CAAAACAACA ATCCATGTTT GGGGAATATT AAAAAAAAAA
  M
  CCAAAAAAAA CCAAAAAACA AAAAACCAAC CCTTTTGTAG CCGTTGGAAG CTTCATGTCC
  TTTCTTCTAA CTTGTCTTCT CCAGCGGAAG TGACCGCGGT GGCTTCAATA AATTTGGTGG
  TAAGTGAACA GAGTTTCCAA AATTCCCAAC TCCCAGCAAT GCTTTGTCTG ATTGTTCATT
  TGCAGATGTC TTAGCGTGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8739678	WI_WGS_7_117836124	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6333668					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127573487 () rs orientation: forward

Symbol	Name	Function Class
Fus	fused in sarcoma	within coordinates
Tssr69329	transcription start site region 69329	686 bp downstream
Tssr69330	transcription start site region 69330	78 bp upstream