rs6333671 SNP Detail

Summary

• ID
  rs6333671
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127573490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGAGCTTT TTTTTTCCAG
  AGGATATAGA TAAAACTTTT TAAAGTAAAA TCCTTAACTG TGTCTGAGAA ATTGCACACG
  TGTGTGTGAT AAGCTCAAAG GTCAGACAAG GGTGGTCAGG AAGGGGTATA TTTTAGTAGC
  CTCTTGAATC TTTTTCCCAA AACAACAATC CATGTTTGGG GAATATTAAA AAAAAAACCC
  M
  AAAAAAACCA AAAAACAAAA AACCAACCCT TTTGTAGCCG TTGGAAGCTT CATGTCCTTT
  CTTCTAACTT GTCTTCTCCA GCGGAAGTGA CCGCGGTGGC TTCAATAAAT TTGGTGGTAA
  GTGAACAGAG TTTCCAAAAT TCCCAACTCC CAGCAATGCT TTGTCTGATT GTTCATTTGC
  AGATGTCTTA GCGTGTTAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8739681	WI_WGS_7_117836127	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6333671					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127573490 () rs orientation: forward

Symbol	Name	Function Class
Fus	fused in sarcoma	within coordinates
Tssr69329	transcription start site region 69329	689 bp downstream
Tssr69330	transcription start site region 69330	75 bp upstream