rs6336640 SNP Detail

Summary

• ID
  rs6336640
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:175173679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAATATGAA CTAACCAGTA
  CCCCCCAGAG CTGTGTCTCT AGTTGCATAT GTAGCAGATG ATGGCCTAGT TGAGTTGACC
  ATCAATGGGA GAAGAGGCCC TTGGTCTTGC GAAGATCATA TGCCCCAGTA CAGGAGAATG
  CCAGAGCTAG GAAGCAGAAG TGGGTGGGTT GTGGAGCAGG GCAGGGGGAG AGTATAGGGG
  R
  CTTTGGGGAT AGCATTTGAA ATGTAAATGA AGAAAATATC TAATAATAAT AATAATAAAG
  ACAATGGCTT TGCCTACTCT TACAGAATAG ATGCAGGTCA GATGGGGACA ATTTTCAGTC
  TTAATTGGGG ATGGTGAAGG GCGTATTTCT ATGATTCCAG GGCCTCATGA GGTATAAATG
  TAATTATTCT GTTCTCATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8742664	WI_WGS_1_176659588	WI	MOUSE	f	SNP	G	A
ss320149958	CHEV_1_177276244	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6336640					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175173679 () rs orientation: forward

Symbol	Name	Function Class
Rgs7	regulator of G protein signaling 7	Intron
Rr423817	regulatory region 423817	263 bp proximal