rs6337114 SNP Detail

Summary

• ID
  rs6337114
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3716417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCACCACA GCCCTTTGCT
  TTAAGAATGC TCTTTGTGTG CCCCTTACTT GCTATAAGTA GTAAACCTCT TTTCTCTCTT
  TTATGACCTA GTTGGACCTT TGCTGTCAAC CTGCTACAAT GAGTTAGAGT GAGATAACCC
  CAAAACAAAT ACATGTTTCT CAAAGTCCAG TCCTCACTGT CCCTCAAGAT CAAGTACACA
  Y
  TTTTCTACAT TTTTCTGGAA AGTGCCTACA TGAATAGCAA AAGATAACCC TGACATCTTT
  GTTACCTATG TCAGTTTTCT TTAAGAAGAA TCTAGGAGGC CATCAAGTTG TTGCTCTGGT
  CAAAGAGGTG AGGTATCATC TACCTAGTTC ATCACCCAGA TGATATCTCC AGGCCTGTAT
  TTACTTAGTT GGCATCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8743138	WI_WGS_1_3647697	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6337114					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3716417 () rs orientation: forward

Symbol	Name	Function Class
Gm19938	predicted gene, 19938	1115 bp downstream
Xkr4	X-linked Kx blood group related 4	within coordinates