rs6337599 SNP Detail

Summary

• ID
  rs6337599
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3716441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGCTCTT TGTGTGCCCC
  TTACTTGCTA TAAGTAGTAA ACCTCTTTTC TCTCTTTTAT GACCTAGTTG GACCTTTGCT
  GTCAACCTGC TACAATGAGT TAGAGTGAGA TAACCCCAAA ACAAATACAT GTTTCTCAAA
  GTCCAGTCCT CACTGTCCCT CAAGATCAAG TACACATTTT TCTACATTTT TCTGGAAAGT
  R
  CCTACATGAA TAGCAAAAGA TAACCCTGAC ATCTTTGTTA CCTATGTCAG TTTTCTTTAA
  GAAGAATCTA GGAGGCCATC AAGTTGTTGC TCTGGTCAAA GAGGTGAGGT ATCATCTACC
  TAGTTCATCA CCCAGATGAT ATCTCCAGGC CTGTATTTAC TTAGTTGGCA TCTTTTTTAT
  GTAGTAACTT GACAAGGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8743623	WI_WGS_1_3647721	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6337599					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3716441 () rs orientation: forward

Symbol	Name	Function Class
Gm19938	predicted gene, 19938	1091 bp downstream
Xkr4	X-linked Kx blood group related 4	within coordinates