rs6341406 SNP Detail

Summary

• ID
  rs6341406
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26812550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGG ATTTGAACTC AGGACCTTCG
  R
  AAGAGCAGTC GGTGCTCTTA GCCGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss8747439	WI_WGS_14_22195102	WI	MOUSE	f	SNP	G			A
ss39152088	mCV22277455	ABI	CRAMUS_MOUSE	f	SNP		G	G	A	A
ss139210672	ENSMUSSNP1781563	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
ss324569340	CHEV_14_27903779	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs6341406					SNP	G	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26812550 () rs orientation: forward

Symbol	Name	Function Class
Il17rd	interleukin 17 receptor D	within coordinates
Tssr124725	transcription start site region 124725	1179 bp upstream