rs6344234 SNP Detail

Summary

• ID
  rs6344234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122872746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCGTGCTGT GGAATTGACC
  CTGGGAGACC AGGTATGGAA ACAGATGCTG AGAAGCACAG GGGCTGGTGG GAAAGTTCCG
  CTGAATCAGG GAAGGAGGAT GGATGGGTGT GGTGTCAACT GAGCAAAGAG CCGTGAGGTT
  TCCCAGCAGT GTCCTCACAC TTGAGGCCCC ACCAGGGTCT GTAGAGAGCC AGTCAGACAG
  Y
  GCCAGCCCAC CTGACGGGGT CTTGATCAGG CTGAGGTGAA CCCAAAGAAT TACCGTTGTA
  ACGTTACTAG TCATGGTGTG ACAGATGAGC GCCCCAGCAT TATGGGTGCA CACGTGCATG
  TATCATCCAT GCATGTATCA AGGTGCCCCA TGCTGTCCAG CCCTTTGTCA CTGACATAGC
  AGCCAATGAG ATCAATTTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8750277	WI_WGS_8_122216838	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6344234					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122872746 () rs orientation: forward

Symbol	Name	Function Class
Gm39268	predicted gene, 39268	within coordinates
Gm56875	predicted gene, 56875	within coordinates
Rr179926	regulatory region 179926	455 bp proximal
Rr179927	regulatory region 179927	1455 bp proximal
Rr188324	regulatory region 188324	within coordinates