rs6344235 SNP Detail

Summary

• ID
  rs6344235
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122872747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGTGCTGTG GAATTGACCC
  TGGGAGACCA GGTATGGAAA CAGATGCTGA GAAGCACAGG GGCTGGTGGG AAAGTTCCGC
  TGAATCAGGG AAGGAGGATG GATGGGTGTG GTGTCAACTG AGCAAAGAGC CGTGAGGTTT
  CCCAGCAGTG TCCTCACACT TGAGGCCCCA CCAGGGTCTG TAGAGAGCCA GTCAGACAGT
  R
  CCAGCCCACC TGACGGGGTC TTGATCAGGC TGAGGTGAAC CCAAAGAATT ACCGTTGTAA
  CGTTACTAGT CATGGTGTGA CAGATGAGCG CCCCAGCATT ATGGGTGCAC ACGTGCATGT
  ATCATCCATG CATGTATCAA GGTGCCCCAT GCTGTCCAGC CCTTTGTCAC TGACATAGCA
  GCCAATGAGA TCAATTTACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8750278	WI_WGS_8_122216839	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6344235					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122872747 () rs orientation: forward

Symbol	Name	Function Class
Gm39268	predicted gene, 39268	within coordinates
Gm56875	predicted gene, 56875	within coordinates
Rr179926	regulatory region 179926	454 bp proximal
Rr179927	regulatory region 179927	1454 bp proximal
Rr188324	regulatory region 188324	within coordinates