rs6345370 SNP Detail

Summary

• ID
  rs6345370
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:83851941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACC AAGCACAAAG GAGATTTATT
  Y
  ACCCCAGAAG GACAGAGGGT AGGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8751421	WI_WGS_2_84907126	WI	MOUSE	f	SNP			T	C
ss45214965	mCV24811441	ABI	CRAMUS_MOUSE	f	SNP	T	C	T		C
ss146819790	ENSMUSSNP5182623	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C			C
ss320369211	CHEV_2_83861754	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6345370					SNP	T	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:83851941 () rs orientation: forward

Symbol	Name	Function Class
Gm75328	predicted gene, 75328	within coordinates
Rr560215	regulatory region 560215	1808 bp distal
Rr560216	regulatory region 560216	1269 bp distal
Rr560217	regulatory region 560217	1246 bp proximal