rs6348588 SNP Detail

Summary

• ID
  rs6348588
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:75764781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC CAAAGGGCCA CACAGTAAAT
  Y
  CTCAAGACTT CAGAGGCCAT CTGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8754643	WI_WGS_8_74590986	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6348588					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:75764781 () rs orientation: forward

Symbol	Name	Function Class
Gm45820	predicted gene 45820	within coordinates
Rr665481	regulatory region 665481	87 bp proximal
Tom1	target of myb1 trafficking protein	within coordinates
Tssr81815	transcription start site region 81815	1663 bp downstream