rs6350664 SNP Detail

Summary

• ID
  rs6350664
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101422921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAGAAGA GAACTTCAGT
  GTCGTGGCCT CGACTCAATG GATCATCTTT TACTGGTGAA AAAAAGTATC ATTTCTAAAT
  GGGTCAGTTG TTTCCTGTGG GTGAAATTGT TGTCAGCTCC TATATCGCAG CATATGTCAT
  AGCGTGTCCG TTTATGTCAA TTTCAGATAC AGCAGATGGC CACATCTATG TCCATGACAC
  Y
  GTCAGATTGA CTTGTTTAGA AAGTTTACTC AAAACTCAGC TCAGTAGCCT TGGTGACATG
  CTTAGTCTGT TGTCAGAGGT AGCACGAGGC CATTCAGAAA TGCAGAGATT CAAGGTCTCT
  GGCCCTGGAG AATCTCGCTA GCCGCCAGAC ACATGTTTAA GGGCAGAGAA CACATGGAAT
  CCTTGCTCTC GTGCTGGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8756723	WI_WGS_3_101624800	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6350664					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101422921 () rs orientation: forward

Symbol	Name	Function Class
Gm33162	predicted gene, 33162	within coordinates
Rr582065	regulatory region 582065	1029 bp distal
Rr582066	regulatory region 582066	807 bp proximal
Rr582067	regulatory region 582067	1470 bp proximal