rs6351235 SNP Detail

Summary

• ID
  rs6351235
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121324149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACACACT GATGTTCTGG
  GATCTTGAAA CTTCTCCATC AGACATCCTT CCCGGCTTTT CTGTGTGTTC ATGTGTGTTT
  TTTCCTTCAT TCCCTCACTA CCCTAATTAG GTCAGTCCCT GGAGTTGTGT AAGACTCCGC
  ACAGAGGGAA GACACGGACA CTGCACTTGG CTTTAGAATC AGGTTAGAAA AGGTCGTTGG
  R
  GTAGAACCCT GGCTCTGCAG TCCGCCACTC TGGCTACCAT GATTAGGAAT GATCAAGCCA
  CATTAGGAGG CCATATCAGT CAATGTTCCT TGCCTGAGTG TGTGCCCAGG TTCCAATCAT
  CCCACATAGC TGCCAGATGC AGGAGTTATT CAAGAGCCTC TAGGGAACCC AGTCTCAGTC
  TGAGCCCATG ACAGGTCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8757294	WI_WGS_11_122374202	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6351235					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121324149 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4346	CpG island 4346	1484 bp proximal
Fn3k	fructosamine 3 kinase	1630 bp upstream
Rr461974	regulatory region 461974	within coordinates
Rr461975	regulatory region 461975	1100 bp proximal
Tssr106404	transcription start site region 106404	1625 bp upstream