rs6351267 SNP Detail

Summary

• ID
  rs6351267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:166667154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CATCGACAGT
  GAGCGGCTGT ACTGGTGAGA TTTGTGTATC ACTGGCTTAG CACCATTGGT ATCCAGAACA
  GATGGTTGGA GATTCAGAGA CCACCAGCCT CTAGCATGGG CTTGGCCGTA TCTGATGCAT
  CTGACTGAGC CCTAAGAGTG CTGCTCCTGA CCAGAAGAAA ACCTTACACT TGAGTTGGCA
  GCAGGGTGCA TCCGGTGTGT CACAGGAACT TGCAAAGCCA TTGCGTTATG TCAGATGATG
  R
  AAGCTACATC CTGTAGGCCA GTCTTGTAGC CTTCTGTTGG AGGTGGATGA GTTATGTCCT
  TTAAGGACAG GGTCCATGTT GGCTGTTCCT TTCACAAGCT CGGGTGTCAC AGGCCTCGTG
  GGCAGTTACC TGCTGCTTTG TTAGGCAGGC AGTAAGAATG TGTAGACCTT ACCACCTCTA
  GCTGGCCCGG TTCCTTGACT TTCCAAGCAA ATGGAACTAA GAACTTCTTG AAGTGTGTTT
  GGTTCTGTTA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8757326	WI_WGS_2_167795469	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6351267					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:166667154 () rs orientation: forward

Symbol	Name	Function Class
Arfgef2	ARF guanine nucleotide exchange factor 2	within coordinates
Rr397495	regulatory region 397495	1501 bp upstream
Rr570392	regulatory region 570392	1310 bp proximal
Tssr766	transcription start site region 766	97 bp upstream
Tssr21778	transcription start site region 21778	49 bp upstream
Tssr21779	transcription start site region 21779	1835 bp upstream
Tssr27713	transcription start site region 27713	116 bp upstream