rs6351366 SNP Detail

Summary

• ID
  rs6351366
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121324237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TCAGACATCC
  TTCCCGGCTT TTCTGTGTGT TCATGTGTGT TTTTTCCTTC ATTCCCTCAC TACCCTAATT
  AGGTCAGTCC CTGGAGTTGT GTAAGACNCC GCACAGAGGG AAGACACGGA NACTGCACTT
  GGCTTTAGAA TCAGGTTAGA AAAGGTCGTT GGNGTAGAAC CCTGGCTCTG Cagtccgcca
  ctctggctac catgattagg aatgatcaag ccacattagg aggccatatc agtcaatgtt
  Y
  cttgcctgag ngtgtgccca ggttccaatc atcccacata gctgccagat ncaggagtta
  ttcaagagcc tctagggaac ccagtctcAG TCTGAGCCCA TGACAGGTCA CAAGGACCCT
  GGGGATGGCC AGCACTGACA GGCTTTGCCC CTCTGAGGTA TGACAGAGCT CCTAAGATAG
  GCTCCTCAAT GAGGGCTATG NCTACCGAAA ACCCATGCAA ATGTTATCTC TTCATGTGCT
  TTGGGCGTCA                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8757426	WI_WGS_11_122374290	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6351366					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121324237 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4346	CpG island 4346	1396 bp proximal
Fn3k	fructosamine 3 kinase	1542 bp upstream
Rr461974	regulatory region 461974	within coordinates
Rr461975	regulatory region 461975	1012 bp proximal
Tssr106404	transcription start site region 106404	1537 bp upstream