rs6354927 SNP Detail

Summary

• ID
  rs6354927
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:56434356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAGAAGGCA GGGGCTCCCT
  TCGTGGCGGG CCTCCGTAAC CATCTCTTCC ACGGGACACA GGGGCTTAAG GAAAAATAAG
  CATTAAAATC TAGCCATGGA CAAGCTACAT TAGTTATACT CAGGCTATAA AAAGGGATTT
  AATCGAATAT GCTATGGAGC TAAGACAGGA AGCTTCCCAG TCACATAATT TCAGTGTCTA
  S
  TAATTATAAA TGAGATTAAT CGGAATCCAT CAATCAGTCT GAAGCATAAG CATTTAAACA
  AAACATACTA CTGTGCATTT ATGGTGGGAG CATGTGCGTG TGGTAGCGCT AATGTGGGTC
  AGAGGACAAC TCTGTAGTCA ATATGCTATT TCCACTTTTG TGTGTGAATA GCACAGGCTA
  CAAAAAACAG TGATTTTTAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8760998	WI_WGS_X_40460632	WI	MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6354927					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:56434356 () rs orientation: forward

Symbol	Name	Function Class
Rbmx	RNA binding motif protein, X chromosome	within coordinates
Rr8653	regulatory region 8653	1844 bp proximal
Rr395083	regulatory region 395083	897 bp downstream