rs6355395 SNP Detail

Summary

• ID
  rs6355395
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:146237008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAATTTT GTTCTAGTCA
  AAGCCATTTT AGCTACAAAG TTGTAAAGTT CAGCATCTTC CTAGGAATGA TAGAAAACTG
  GCTCATCTAT AGAACAAAAT GACTGTCACA ATGGGCAGAT GCATTGAGAA CTGCAATAAG
  TAATTCAATT CAGTTAATAT GTTCTATGTT CAACCCTATG AAACTACAGC ACAATGTTTT
  R
  AAAATATGCA GTGATATCAA GGCAAATTGT GAAACAGCAG GTAAATAATG AGCTTCCTAG
  AAAGTTTTAT AAGGATGTTC ATTTCTTTTT TTTTTTTTTT TTTAGGTATT TTCCTCGTTT
  ACATTTTCAA TGCTATCCCA AAGGTCCCCC ATACCCACCC ACCCCAATCC CCTACCCACC
  CACTCCCCCT TTTTGGCCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8761469	WI_WGS_1_147233224	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6355395					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:146237008 () rs orientation: forward

Symbol	Name	Function Class
Rr420039	regulatory region 420039	1351 bp distal