rs6359227 SNP Detail

Summary

• ID
  rs6359227
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3878122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGATGCCG GCCCAAAGGT ACTCTGTCCA AGAAGTTTTG
  TCGCTTCTGT GGCCTGCACA CTCTCCTGCA AGAACTGATC TCTGAGAAAC ATGGGATACA
  R
  GATGGTGCTC TCACCTGAGT CCCAGGGTCA GAGGCCTCCC TGGAGGCTTA CTCTCTTCTT
  GCTGGGAAAG TGCCCAGAAG TCTGGGTCTC AGCTCTGCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8765314	WI_WGS_1_3811333	WI	MOUSE	f	SNP	G	A
ss148461535	ENSMUSSNP182802	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6359227					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3878122 () rs orientation: forward

Symbol	Name	Function Class
Rr370728	regulatory region 370728	within coordinates