rs6359262 SNP Detail

Summary

• ID
  rs6359262
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3878146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCCAAGAA GTTTTGTCGC TTCTGTGGCC TGCACACTCT
  CCTGCAAGAA CTGATCTCTG AGAAACATGG GATACAGGAT GGTGCTCTCA CCTGAGTCCC
  R
  GGGTCAGAGG CCTCCCTGGA GGCTTACTCT CTTCTTGCTG GGAAAGTGCC CAGAAGTCTG
  GGTCTCAGCT CTGCCTCTTG GCTGAGGATG AAGGCCCAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8765349	WI_WGS_1_3811357	WI	MOUSE	f	SNP	A	G
ss148461541	ENSMUSSNP2035268	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6359262					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3878146 () rs orientation: forward

Symbol	Name	Function Class
Rr370728	regulatory region 370728	within coordinates