rs6359656 SNP Detail

Summary

• ID
  rs6359656
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59377441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTTGTTT AGCCGCGTTG
  TCAGTGTCTT CATCTCGAAG TTATGTTTAC AAAGGGATAA AGATTAACCG AGAGTGATTA
  CTCGCCCCCT CCTTAGAGAA GTAAGAAAGT TCAAGAAATT CTGTCTTGGG GATAAAGCTG
  TGCTTTTGGT TGTTATGGCA ACAGTCCCGT TTCCCCCACC TCACCCCCAC CCCCAACCCC
  S
  GTGCCTCGTA GTCCTATACT GAAGCAGGGC GATTGCAGTT TCTAGGCCGT GCAGAGAGGT
  AGAATGCCCA TGTGAAGGGA AAGCGGAAGG TCTATAGTCT AGTTTCAGCT CCGGGACTTA
  CTAACAGTCC TTTGGGTGTG GAAGTGGCAA ACTAGTAGGT TCCAGAGACC TTTCTAGAAA
  GAACATCGCA GGGAAAAATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8765744	WI_WGS_19_59454305	WI	MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6359656					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59377441 () rs orientation: forward

Symbol	Name	Function Class
Gm33756	predicted gene, 33756	454 bp upstream
Rr370546	regulatory region 370546	214 bp upstream
Rr550620	regulatory region 550620	1530 bp distal
Rr550621	regulatory region 550621	1654 bp distal
Rr550622	regulatory region 550622	1624 bp distal
Rr550623	regulatory region 550623	312 bp distal
Rr550624	regulatory region 550624	within coordinates
Rr550625	regulatory region 550625	381 bp proximal