rs6360410 SNP Detail

Summary

• ID
  rs6360410
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:117299820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGAGGCA GCGATCTGAA
  AGAGTTACTC AGACATGTAA AGAACAGGAG ATGTCTTAAG GGCGTGGGGT TAAGTGTACA
  TGGAGCTCAT CCCAGCAGAG AAGGGACAAG AGGCTCAGGC TCCTTAATTC TCTACACCCC
  AGTCAGCCCA CAGCTCCTAC AGTGTTCTAT AGGGACTCCA GGGGGCCACA TGCTCCAATT
  Y
  CTTTTTCCTG TGACCAAATA CAGCCAAGGT GACTGTACTC TCAGGCTCCC CATGGCCAAG
  GTGGCACAGG CTGGTGGAGA ATAGGGACTT AAACTCTTTT CTTCCTGAAC CCTTCTGAGC
  TCTAAAGCAT TTCTATAGAG CAAAGCAAGG TCATTCTAAG GCCCACAAAG CCATGTGCAT
  ACGCGGGAGC CATAGTCTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8766504	WI_WGS_8_116559101	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6360410					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:117299820 () rs orientation: forward

Symbol	Name	Function Class
Cdyl2	chromodomain protein, Y chromosome-like 2	1319 bp downstream
Tssr83067	transcription start site region 83067	1189 bp upstream
Tssr83068	transcription start site region 83068	881 bp downstream