rs6361110 SNP Detail

Summary

• ID
  rs6361110
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121503987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CTAGTTATCA
  CAATTATTTT GTGAGATGCC TATCCTTTTG TGAGAGAGCT AAAACCCAAG AGTGGATTTC
  CCAAGGAGGA CCCTGTACTC ACCAGAGTGA GGGCTGAAGG TGCGGAGGAA TGCCTTCCTG
  GCTGTTCCCT CCCTCTCAAT ATCCAGCCTC TGTCAGTTCC TCTCAAGAGT TGCAATGTCC
  TGAAGCCAGA GGGCAAGGAA TCTTGGGAGA TTACTTGTGT GTCTTACAAA ACCAGTCTCA
  K
  ATCTACGGCA AAATGCAAGT GATTGGCATT ATCCTGAAAT CAACAAGGTG AGAAGTAGGC
  TGCAAATATG ATGGGGAAGA GGAATACCAT GAGGTCCATA GGTCCCCTCT GCCATGTGTT
  CTGAGTCACC ACAGCAACGG GGTCAAGCAA CCATAGATTA ATACCTCTGA AACCATGGGC
  CAAAATAAAC AAACCTTTCC TCTTCTTAAG TTGAATTATC TCAGGTATTT NTTAGAGTAG
  TACAAAGTAC                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8767205	WI_WGS_3_122072870	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6361110					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121503987 () rs orientation: forward

Symbol	Name	Function Class
D3Mit288	DNA segment, Chr 3, Massachusetts Institute of Technology 288	1499 bp distal
Gm43607	predicted gene 43607	918 bp downstream
Gm43608	predicted gene 43608	92 bp upstream