rs6363519 SNP Detail

Summary

• ID
  rs6363519
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:74870961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CATGGCCAAG
  GGGCATAGGC TCTGCCAACC AAAGCCCGAG GTTCAAACAA GGCAGAGGCC AAAGCTCCAG
  CTAAGGTCCA GCTTCAGCTC CAGCTCAGGC TCCCAGAGGG GCCCAGGCCC CTGAGACGGC
  CCCATAGAAA AAGGCTCCTG CCAGTGTGAA GACAGATGGA CTGCTGGGAC ACACCCACCT
  ACCTACACAC TATTTGCAGA TGACCAGTGT CTTGGGCttt tttttttttt tttttttttt
  Y
  tttttttACA AATAAACTTG AGGCAAGAAA AAAAATAGTT TGCCAGTGTT TTGCTGTAGA
  GAACACCTCT AGATCTGGGC AATGGTGATG TGTGTTTAGA TGCCTTCTCG GGGATCTGAA
  GGCTCCTTCT GATGAAGACT ACTCAGTGGA GTCTAGAGAC ATCTGATGGG TGATTGAGAA
  GGGATGAAAA GCCAGGGCAG CCNTAAGATT CCACTGAAAT GCTCTTTGTC CCTGCATGGG
  GGATTGATCT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8769617	WI_WGS_10_75429638	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6363519					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:74870961 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1716	CpG island 1716	1748 bp proximal
Gm40692	predicted gene, 40692	102 bp downstream
Gm68172	predicted gene, 68172	551 bp downstream
Rab36	RAB36, member RAS oncogene family	1929 bp upstream
Rr433913	regulatory region 433913	1447 bp proximal
Tssr94068	transcription start site region 94068	1948 bp upstream